python3-h5py: Upgrade 3.1.0 -> 3.2.1

Upgrade to release 3.2.1:

- Added support to use the HDF5 ROS3 driver to access HDF5 files
  on S3
- Setting the config option default_file_mode to values other than
  'r' is deprecated. Pass the desired mode when opening a
  :class:`~.File` instead.
- :exc:`OSError` exceptions raised by h5py should now have a useful
  .errno attribute, where HDF5 provides this information.
  Subclasses such as :exc:`FileNotFoundError` should also be raised
  where appropriate.
- Fix reading data with a datatype of variable-length arrays of
  fixed length strings.
- Fix :meth:`.Dataset.read_direct` and :meth:`.Dataset.write_direct`
  when the source and destination have different shapes.
- Fix selecting data using integer indices in
  :meth:`.Dataset.read_direct` and :meth:`.Dataset.write_direct`.
- Fix exception handling in :meth:`.Group.visititems`.
- Issue a warning when File(..., swmr=True) is specified with any
  mode other than 'r', as the SWMR option is ignored in these cases.
- Fix NumPy 1.20 deprecation warnings concerning the use of None as
  shape, and the deprecated aliases np.float, np.int and np.bool.
- Fix :attr:`.File.driver` when the read-only S3 driver is
  available.

Add hdf5-native as a dependency to avoid:

error: libhdf5.so: cannot open shared object file: No such file or directory

Signed-off-by: Leon Anavi <leon.anavi@konsulko.com>
Signed-off-by: Khem Raj <raj.khem@gmail.com>
Signed-off-by: Trevor Gamblin <trevor.gamblin@windriver.com>

1 files changed, 31 insertions, 0 deletions

diff --git a/meta-python/recipes-devtools/python/python3-h5py_3.2.1.bb b/meta-python/recipes-devtools/python/python3-h5py_3.2.1.bb
new file mode 100644
index 0000000000..5faa0b8080
--- /dev/null
+++ b/meta-python/recipes-devtools/python/python3-h5py_3.2.1.bb
@@ -0,0 +1,31 @@
+SUMMARY = "Provides both a high- and low-level interface to the HDF5 library from Python."
+HOMEPAGE = "https://www.h5py.org/"
+SECTION = "devel/python"
+LICENSE = "BSD-3-Clause"
+LIC_FILES_CHKSUM = "file://LICENSE;md5=113251d71fb0384712c719b567261c5c"
+
+SRC_URI[sha256sum] = "89474be911bfcdb34cbf0d98b8ec48b578c27a89fdb1ae4ee7513f1ef8d9249e"
+
+SRC_URI_append = " \
+           file://0001-setup_build.py-avoid-absolute-path.patch \
+           file://0001-setup.py-Fix-numpy-version.patch \
+          "
+
+inherit pypi setuptools3
+
+BBCLASSEXTEND = "native"
+
+DEPENDS = "python3-pkgconfig-native \
+           python3-cython-native \
+           python3-numpy-native \
+           python3-six-native \
+           hdf5-native \
+           python3 \
+           hdf5 \
+          "
+
+RDEPENDS_${PN} = "python3-numpy \
+                  python3-six \
+                 "
+
+export HDF5_VERSION="1.8.21"