From f95812d0bc1bf25778566a44791257e5a113ab63 Mon Sep 17 00:00:00 2001 From: Leon Anavi Date: Tue, 30 Mar 2021 14:10:06 +0300 Subject: python3-h5py: Upgrade 3.1.0 -> 3.2.1 Upgrade to release 3.2.1: - Added support to use the HDF5 ROS3 driver to access HDF5 files on S3 - Setting the config option default_file_mode to values other than 'r' is deprecated. Pass the desired mode when opening a :class:`~.File` instead. - :exc:`OSError` exceptions raised by h5py should now have a useful .errno attribute, where HDF5 provides this information. Subclasses such as :exc:`FileNotFoundError` should also be raised where appropriate. - Fix reading data with a datatype of variable-length arrays of fixed length strings. - Fix :meth:`.Dataset.read_direct` and :meth:`.Dataset.write_direct` when the source and destination have different shapes. - Fix selecting data using integer indices in :meth:`.Dataset.read_direct` and :meth:`.Dataset.write_direct`. - Fix exception handling in :meth:`.Group.visititems`. - Issue a warning when File(..., swmr=True) is specified with any mode other than 'r', as the SWMR option is ignored in these cases. - Fix NumPy 1.20 deprecation warnings concerning the use of None as shape, and the deprecated aliases np.float, np.int and np.bool. - Fix :attr:`.File.driver` when the read-only S3 driver is available. Add hdf5-native as a dependency to avoid: error: libhdf5.so: cannot open shared object file: No such file or directory Signed-off-by: Leon Anavi Signed-off-by: Khem Raj Signed-off-by: Trevor Gamblin --- .../recipes-devtools/python/python3-h5py_3.2.1.bb | 31 ++++++++++++++++++++++ 1 file changed, 31 insertions(+) create mode 100644 meta-python/recipes-devtools/python/python3-h5py_3.2.1.bb (limited to 'meta-python/recipes-devtools/python/python3-h5py_3.2.1.bb') diff --git a/meta-python/recipes-devtools/python/python3-h5py_3.2.1.bb b/meta-python/recipes-devtools/python/python3-h5py_3.2.1.bb new file mode 100644 index 0000000000..5faa0b8080 --- /dev/null +++ b/meta-python/recipes-devtools/python/python3-h5py_3.2.1.bb @@ -0,0 +1,31 @@ +SUMMARY = "Provides both a high- and low-level interface to the HDF5 library from Python." +HOMEPAGE = "https://www.h5py.org/" +SECTION = "devel/python" +LICENSE = "BSD-3-Clause" +LIC_FILES_CHKSUM = "file://LICENSE;md5=113251d71fb0384712c719b567261c5c" + +SRC_URI[sha256sum] = "89474be911bfcdb34cbf0d98b8ec48b578c27a89fdb1ae4ee7513f1ef8d9249e" + +SRC_URI_append = " \ + file://0001-setup_build.py-avoid-absolute-path.patch \ + file://0001-setup.py-Fix-numpy-version.patch \ + " + +inherit pypi setuptools3 + +BBCLASSEXTEND = "native" + +DEPENDS = "python3-pkgconfig-native \ + python3-cython-native \ + python3-numpy-native \ + python3-six-native \ + hdf5-native \ + python3 \ + hdf5 \ + " + +RDEPENDS_${PN} = "python3-numpy \ + python3-six \ + " + +export HDF5_VERSION="1.8.21" -- cgit v1.2.3-54-g00ecf