summaryrefslogtreecommitdiffstats
path: root/meta-oe/recipes-support/hdf5
Commit message (Collapse)AuthorAgeFilesLines
* hdf5: fix shasum, downloadfilenameTrevor Gamblin2026-01-301-2/+4
| | | | | | | | | | | | | | | | | | | | | | | Fixes: #1023 Upstream seems to have regenerated the archive, as the checksum no longer matches the one specified in the recipe: |WARNING: hdf5-2.0.0-r0 do_fetch: Checksum failure encountered with download of https://support.hdfgroup.org/releases/hdf5/v2_0/v2_0_0/downloads/hdf5-2.0.0.tar.gz - will attempt other sources if available |WARNING: hdf5-2.0.0-r0 do_fetch: Checksum mismatch for local file /buildcache/downloads/hdf5-2.0.0.tar.gz |Cleaning and trying again. |WARNING: hdf5-2.0.0-r0 do_fetch: Renaming /buildcache/downloads/hdf5-2.0.0.tar.gz to /buildcache/downloads/hdf5-2.0.0.tar.gz_bad-checksum_a7a8f43e76e825ea22234bc735d5b184e880d305e33e4c9bb93a3912421c9973 |ERROR: hdf5-2.0.0-r0 do_fetch: Checksum failure fetching https://support.hdfgroup.org/releases/hdf5/v2_0/v2_0_0/downloads/hdf5-2.0.0.tar.gz |ERROR: hdf5-2.0.0-r0 do_fetch: Bitbake Fetcher Error: ChecksumError('Checksum mismatch!\nFile: \'/buildcache/downloads/hdf5-2.0.0.tar.gz\' has sha256 checksum \'a7a8f43e76e825ea22234bc735d5b184e880d305e33e4c9bb93a3912421c9973\' when \'6e45a4213cb11bb5860) |ERROR: Logfile of failure stored in: /home/tgamblin/workspace/yocto/openembedded-core/build/tmp/work/x86-64-v3-poky-linux/hdf5/2.0.0/temp/log.do_fetch.2054297 However, the tarballs look identical. Update the hash and be explicit about downloadfilename to avoid any mirroring issues. A note has been left that this measure can be removed with a future upgrade. Signed-off-by: Trevor Gamblin <tgamblin@baylibre.com> Reviewed-by: Yoann Congal <yoann.congal@smile.fr> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: inherit pkgconfigChangqing Li2025-12-021-1/+4
| | | | | | | | inherit pkgconfig, and fix install conflict when enable multilib, this can also improve reproducibility Signed-off-by: Changqing Li <changqing.li@windriver.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: fix do_package failure when multilib enabledChangqing Li2025-11-271-5/+1
| | | | | | | | | | | | After upgrading hdf5 to 2.0.0, h5cc and h5hlcc will only be generated when pkg-config is found. With current default config, it will not be generated, remove related configs to fix do_package failure | DEBUG: Executing shell function multilibscript_rename | mv: cannot stat '/tmp/work/cortexa72-wrs-linux/hdf5/2.0.0/package/usr/bin/h5cc': No such file or directory Signed-off-by: Changqing Li <changqing.li@windriver.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: upgrade 1.14.6 -> 2.0.0Gyorgy Sarvari2025-11-139-358/+39
| | | | | | | | | | | | | Drop patches that were incorporated in this release. License-Update: Switched to 3-clause BSD license: https://github.com/HDFGroup/hdf5/commit/edd7bea821b63f7d09e29296d341a5d6965012f9 Release notes: https://github.com/HDFGroup/hdf5/releases/tag/2.0.0 Signed-off-by: Gyorgy Sarvari <skandigraun@gmail.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: patch CVE-2025-6750Gyorgy Sarvari2025-10-142-0/+88
| | | | | | | | | | Details: https://nvd.nist.gov/vuln/detail/CVE-2025-6750 Pick the patch that is marked to resolve the issue linked in the nvd report. Signed-off-by: Gyorgy Sarvari <skandigraun@gmail.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: patch CVE-2025-2925Gyorgy Sarvari2025-10-142-0/+53
| | | | | | | | | | Details: https://nvd.nist.gov/vuln/detail/CVE-2025-2925 Pick the patch that's marked to resolve the issue linked in the nvm report. Signed-off-by: Gyorgy Sarvari <skandigraun@gmail.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: patch CVE-2025-2924Gyorgy Sarvari2025-10-142-0/+37
| | | | | | | | | | Details: https://nvd.nist.gov/vuln/detail/CVE-2025-2924 Pick the patch that is marked to resolve the issue linked in the nvd report. Signed-off-by: Gyorgy Sarvari <skandigraun@gmail.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: patch CVE-2025-2914Gyorgy Sarvari2025-10-142-0/+48
| | | | | | | | | Details: https://nvd.nist.gov/vuln/detail/CVE-2025-2914 Pick the patch that is linked in the issue from the nvd report. Signed-off-by: Gyorgy Sarvari <skandigraun@gmail.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: patch CVE-2025-2310Gyorgy Sarvari2025-10-142-0/+42
| | | | | | | | | Details: https://nvd.nist.gov/vuln/detail/CVE-2025-2310 Pick the patch that mentions the CVE in its description. Signed-off-by: Gyorgy Sarvari <skandigraun@gmail.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: patch CVE-2025-2153Gyorgy Sarvari2025-10-142-5/+52
| | | | | | | | | Details: https://nvd.nist.gov/vuln/detail/CVE-2025-2153 Pick the patch that resolved the issue from the nvd report. Signed-off-by: Gyorgy Sarvari <skandigraun@gmail.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: upgrade 1.14.4-3 -> 1.14.6Gyorgy Sarvari2025-10-062-5/+5
| | | | | | | | | | | | This upgrade contains fixes for the following vulnerabilities: CVE-2025-2912, CVE-2025-2913, CVE-2025-2914, CVE-2025-2915, CVE-2025-2923, CVE-2025-2924, CVE-2025-2925, CVE-2025-2926, CVE-2025-6269, CVE-2025-6270, CVE-2025-6516 Changelog: https://github.com/HDFGroup/hdf5/blob/hdf5_1_14_6/release_docs/RELEASE.txt Signed-off-by: Gyorgy Sarvari <skandigraun@gmail.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5-native: Fix recipe task signatureRichard Purdie2025-06-251-0/+1
| | | | | | | | | | | The task signature for hdf5-native:do_unpack is currently machine specific due to the use of qemu. This isn't used in the native case but the do_unpack task was being compromised. Fix this by adding a class-native override. This helps ensure yocto-check-layer passes for layers referencing meta-oe. Signed-off-by: Richard Purdie <richard.purdie@linuxfoundation.org> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* Revert "recipes: adapt to qemu.bbclass refactoring"Chen Qi2025-05-291-2/+2
| | | | | | | | | | | | | | This reverts commit 24ff52ba3b73757cc0255a5b19822e2e4d3d4e0a. The original patch was my bad. The patches for oe-core were re-worked, but I forgot the recall this patch. In fact, inheriting qemu is needed because it sets a clear barriar for people to use qemu user mode. And the QEMU_OPTIONS settings are also in qemu.bbclass. Signed-off-by: Chen Qi <Qi.Chen@windriver.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* recipes: adapt to qemu.bbclass refactoringChen Qi2025-05-031-2/+2
| | | | | | | | | | | Avoid inheriting qemu.bbclass and use oe.qemu.xxx instead. Also, the 'qemu-native' dep is replaced by 'qemuwrapper-cross' for PACKAGE_WRITE_DEPS. qemuwrapper-cross is the one that is actually used by postints and it has 'qemu-native' in DEPENDS. Signed-off-by: Chen Qi <Qi.Chen@windriver.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: upgrade to 1.14.4Yogita Urade2024-08-012-40/+14
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Release notes: https://github.com/HDFGroup/hdf5/blob/hdf5_1.14.4.3/release_docs/RELEASE.txt License update: link update from https://raw.githubusercontent.com/hdfgroup/hdf5/develop/COPYING_LBNL_HDF5 to https://raw.githubusercontent.com/hdfgroup/hdf5/hdf5_1_14/COPYING_LBNL_HDF5. Upstream has only Released tar file extension is .gz so SRC_URI tar file extension changed from .bz2 to .gz Fixes File /usr/lib/libhdf5.settings in package hdf5 contains reference to TMPDIR File /usr/src/debug/hdf5/1.14.4-3/src/H5build_settings.c in package hdf5-src contains reference to TMPDIR [buildpaths] - Running H5make_libsettings is no longer required for cross-compiling The functionality of H5make_libsettings is now handled via template files, so H5make_libsettings has been removed. - Running H5detect is no longer required for cross-compiling The functionality of H5detect is now exercised at library startup, so H5detect has been removed Rework the patch 0001-cmake-remove-build-flags.patch to fix the build path issue. Signed-off-by: Yogita Urade <yogita.urade@windriver.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* Remove unused SRC_DISTRIBUTE_LICENSESRoss Burton2023-12-091-2/+0
| | | | | | | | This variable was removed in oe-core 8c9ef5, and didn't do what any of these recipes seem to be using it for. Signed-off-by: Ross Burton <ross.burton@arm.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: Fix install conflict when enable multilib.Wang Mingyu2023-11-061-1/+5
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Error: Transaction test error: file /usr/bin/h5cc conflicts between attempted installs of lib32-hdf5-1.14.2-r0.armv7ahf_neon and hdf5-1.14.2-r0.cortexa57 file /usr/bin/h5hlcc conflicts between attempted installs of lib32-hdf5-1.14.2-r0.armv7ahf_neon and hdf5-1.14.2-r0.cortexa57 The differences of h5cc are as follows: @@ -44,7 +44,7 @@ exit $status ;; *) - /usr/bin/arm-pokymllib32-linux-gnueabi/arm-pokymllib32-linux-gnueabi-clang $@ `pkg-config --define-variable=prefix=$dir --cflags --libs hdf5` + /usr/bin/aarch64-poky-linux/aarch64-poky-linux-clang $@ `pkg-config --define-variable=prefix=$dir --cflags --libs hdf5` status=$? exit $status ;; The differences of h5hlcc are as follows: @@ -44,7 +44,7 @@ exit $status ;; *) - /usr/bin/arm-pokymllib32-linux-gnueabi/arm-pokymllib32-linux-gnueabi-clang $@ `pkg-config --define-variable=prefix=$dir --cflags --libs hdf5_hl` + /usr/bin/aarch64-poky-linux/aarch64-poky-linux-clang $@ `pkg-config --define-variable=prefix=$dir --cflags --libs hdf5_hl` status=$? exit $status ;; Signed-off-by: Wang Mingyu <wangmy@fujitsu.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: Upgrade to 1.14.2Mingli Yu2023-09-202-33/+76
| | | | | | | | | | | | | | | | | | | License Update: link update from http://support.hdfgroup.org/ftp/HDF5/releases/COPYING_LBNL_HDF5 to https://raw.githubusercontent.com/hdfgroup/hdf5/develop/COPYING_LBNL_HDF5. Rework the patch 0001-cmake-remove-build-flags.patch to fix the build path issue. Add zlib depends to fix the below failure: /build/tmp/work/core2-64-poky-linux/hdf5/1.14.2/recipe-sysroot-native/usr/bin/x86_64-poky-linux/../../libexec/x86_64-poky-linux/gcc/x86_64-poky-linux/13.2.0/ld: bin/libhdf5.so.310.2.0: undefined reference to `inflateEnd' /build/tmp/work/core2-64-poky-linux/hdf5/1.14.2/recipe-sysroot-native/usr/bin/x86_64-poky-linux/../../libexec/x86_64-poky-linux/gcc/x86_64-poky-linux/13.2.0/ld: bin/libhdf5.so.310.2.0: undefined reference to `inflate' /build/tmp/work/core2-64-poky-linux/hdf5/1.14.2/recipe-sysroot-native/usr/bin/x86_64-poky-linux/../../libexec/x86_64-poky-linux/gcc/x86_64-poky-linux/13.2.0/ld: bin/libhdf5.so.310.2.0: undefined reference to `compress2' /build/tmp/work/core2-64-poky-linux/hdf5/1.14.2/recipe-sysroot-native/usr/bin/x86_64-poky-linux/../../libexec/x86_64-poky-linux/gcc/x86_64-poky-linux/13.2.0/ld: bin/libhdf5.so.310.2.0: undefined reference to `inflateInit_' collect2: error: ld returned 1 exit status Signed-off-by: Mingli Yu <mingli.yu@windriver.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: Fix install conflict when enable multilib.Wang Mingyu2023-04-131-1/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Error: Transaction test error: file /usr/include/H5pubconf.h conflicts between attempted installs of hdf5-dev-1.14.0-r0.core2_64 and lib32-hdf5-dev-1.14.0-r0.i686 The differences between lib32-hdf5-dev and hdf5-dev are as follows: @@ -479,10 +479,10 @@ #define H5_SIZEOF_INT8_T 1 /* The size of `int_fast16_t', as computed by sizeof. */ -#define H5_SIZEOF_INT_FAST16_T 4 +#define H5_SIZEOF_INT_FAST16_T 8 /* The size of `int_fast32_t', as computed by sizeof. */ -#define H5_SIZEOF_INT_FAST32_T 4 +#define H5_SIZEOF_INT_FAST32_T 8 /* The size of `int_fast64_t', as computed by sizeof. */ #define H5_SIZEOF_INT_FAST64_T 8 @@ -505,16 +505,16 @@ #if !defined(__APPLE__) /* The size of `size_t', as computed by sizeof. */ -#define H5_SIZEOF_SIZE_T 4 +#define H5_SIZEOF_SIZE_T 8 /* The size of `ssize_t', as computed by sizeof. */ -#define H5_SIZEOF_SSIZE_T 4 +#define H5_SIZEOF_SSIZE_T 8 /* The size of `long', as computed by sizeof. */ -#define H5_SIZEOF_LONG 4 +#define H5_SIZEOF_LONG 8 /* The size of `long double', as computed by sizeof. */ -#define H5_SIZEOF_LONG_DOUBLE 12 +#define H5_SIZEOF_LONG_DOUBLE 16 #else @@ -538,7 +538,7 @@ # elif defined(__aarch64__) #define H5_SIZEOF_LONG_DOUBLE 8 # else - #define H5_SIZEOF_LONG_DOUBLE 12 + #define H5_SIZEOF_LONG_DOUBLE 16 # endif #endif @@ -557,13 +557,13 @@ #define H5_SIZEOF_OFF_T 8 /* The size of `ptrdiff_t', as computed by sizeof. */ -#define H5_SIZEOF_PTRDIFF_T 4 +#define H5_SIZEOF_PTRDIFF_T 8 /* The size of `short', as computed by sizeof. */ #define H5_SIZEOF_SHORT 2 /* The size of `time_t', as computed by sizeof. */ -#define H5_SIZEOF_TIME_T 4 +#define H5_SIZEOF_TIME_T 8 /* The size of `uint16_t', as computed by sizeof. */ #define H5_SIZEOF_UINT16_T 2 @@ -578,10 +578,10 @@ #define H5_SIZEOF_UINT8_T 1 /* The size of `uint_fast16_t', as computed by sizeof. */ -#define H5_SIZEOF_UINT_FAST16_T 4 +#define H5_SIZEOF_UINT_FAST16_T 8 /* The size of `uint_fast32_t', as computed by sizeof. */ -#define H5_SIZEOF_UINT_FAST32_T 4 +#define H5_SIZEOF_UINT_FAST32_T 8 /* The size of `uint_fast64_t', as computed by sizeof. */ #define H5_SIZEOF_UINT_FAST64_T 8 Signed-off-by: Wang Mingyu <wangmy@fujitsu.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: Upgrade to 1.14.0Khem Raj2023-03-013-6/+6
| | | | Signed-off-by: Khem Raj <raj.khem@gmail.com>
* .patch: fix Upstream-Status formatting issues reported by patchreview tool ↵Martin Jansa2023-02-241-1/+1
| | | | | | | from oe-core Signed-off-by: Martin Jansa <Martin.Jansa@gmail.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: Upgrade to 1.13.2Khem Raj2022-09-058-2231/+84
| | | | | | | | | | | | | | | | | | | License-Update: Add attribution to Lawrence Livermore National Laboratory and the United States Department of Energy Drop the Advertizing Clause from COPYING Forward port patches Drop 0001-cross-compiling-support.patch bring in qemu usermode to do runtime pieces of build Delete cached source files, as they are no longer needed Upgrade version info in python3-h5py as well to match the upgraded version number Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: improve reproducibilityMingli Yu2021-08-062-0/+66
| | | | | | | Remove the build flags to improve reproducibility. Signed-off-by: Mingli Yu <mingli.yu@windriver.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* Convert to new override syntaxMartin Jansa2021-08-031-2/+2
| | | | | | | | | | This is the result of automated script (0.9.1) conversion: oe-core/scripts/contrib/convert-overrides.py . converting the metadata to use ":" as the override character instead of "_". Signed-off-by: Martin Jansa <Martin.Jansa@gmail.com>
* hdf5: Shorten SUMMARY and move long text to DESCRIPTIONAndreas Müller2020-10-131-1/+2
| | | | | Signed-off-by: Andreas Müller <schnitzeltony@gmail.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: Upgrade to 1.8.21Khem Raj2019-12-132-16/+12
| | | | | | Forward port 0001-cross-compiling-support.patch Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: fix installed-vs-shipped QA WARNINGHongxu Jia2019-03-141-0/+1
| | | | | | | | | | | | | | While baselib = 'lib64', there is a installed-vs-shipped QA WARNING ... WARNING: QA Issue: hdf5: Files/directories were installed but not shipped in any package: /usr/lib/libhdf5_hl_cpp.so.1.8.19 /usr/lib/libhdf5.so ... Set variable HDF5_INSTALL_LIB_DIR to replace hardcode `lib'. Signed-off-by: Hongxu Jia <hongxu.jia@windriver.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
* hdf5: support 32-bit targetHongxu Jia2019-03-073-3/+979
| | | | | | Add pre-generated 32-bit H5Tinit.c to support 32-bit target Signed-off-by: Hongxu Jia <hongxu.jia@windriver.com>
* hdf5: add version 1.8.19Hongxu Jia2019-02-175-0/+1266
License HDF5 is BSD-style. https://support.hdfgroup.org/products/licenses.html Signed-off-by: Hongxu Jia <hongxu.jia@windriver.com> Signed-off-by: Khem Raj <raj.khem@gmail.com>
generated by cgit v1.2.3-54-g00ecf (git 2.39.0) at 2026-07-19 18:55:17 +0000