mariadb: Upgrade to 10.3.13

Per https://mariadb.org/about/maintenance-policy/,
mariadb 5.5.x series only supported until next year
April 2020, so upgrade it to 10.3.13.

Remove some deprecated patches, add some
new patches to fix build failure and rework
two patches to avoid fuzz warnings.

Add -latomic to linker flags for armv5

Use -pthread to link for mussing  atomic symbols on arches e.g. riscv

Fixes issues like
ld.bfd: librocksdblib.a(memtable.cc.o):/usr/include/c++/9.0.1/bits/atomic_base.h:438: more undefined references to `__atomic_compare_exchange_1' follow

Fix build with musl

add libxml2 to depends

Fix build with clang

Signed-off-by: Mingli Yu <mingli.yu@windriver.com>
Signed-off-by: Khem Raj <raj.khem@gmail.com>

1 files changed, 22 insertions, 12 deletions

diff --git a/meta-oe/recipes-dbs/mysql/mariadb.inc b/meta-oe/recipes-dbs/mysql/mariadb.inc
index 8ca5b2ba4..00a9d668c 100644
--- a/meta-oe/recipes-dbs/mysql/mariadb.inc
+++ b/meta-oe/recipes-dbs/mysql/mariadb.inc
@@ -4,10 +4,7 @@ SECTION = "libs"
 LICENSE = "GPLv2"
 LIC_FILES_CHKSUM = "file://COPYING;md5=751419260aa954499f7abaabaa882bbe"
 
-SRC_URI = "https://downloads.mariadb.org/f/${BP}/source/${BP}.tar.gz \
-           file://fix-cmake-module-path.patch \
-           file://remove-bad-path.patch \
-           file://fix-mysqlclient-r-version.patch \
+SRC_URI = "https://downloads.mariadb.org/interstitial/${BPN}-${PV}/source/${BPN}-${PV}.tar.gz \
            file://my.cnf \
            file://mysqld.service \
            file://install_db.service \
@@ -15,11 +12,14 @@ SRC_URI = "https://downloads.mariadb.org/f/${BP}/source/${BP}.tar.gz \
            file://mysql-systemd-start \
            file://configure.cmake-fix-valgrind.patch \
            file://fix-a-building-failure.patch \
-           file://change-cc-to-cc-version.patch \
+           file://support-files-CMakeLists.txt-fix-do_populate_sysroot.patch \
+           file://sql-CMakeLists.txt-fix-gen_lex_hash-not-found.patch \
            file://0001-disable-ucontext-on-musl.patch \
+           file://c11_atomics.patch \
+           file://clang_version_header_conflict.patch \
           "
-SRC_URI[md5sum] = "6375d577e9539b839f44d857e70f82b9"
-SRC_URI[sha256sum] = "56a365af71b8a9ec8bfee0801e2dec95011da8ee7507986ca329be11296411db"
+SRC_URI[md5sum] = "603ce42e35b9a688f2cca05275acb5cb"
+SRC_URI[sha256sum] = "b2aa857ef5b84f85a7ea60a1eac7b34c0ca5151c71a0d44ce2d7fb028d71459a"
 
 UPSTREAM_CHECK_URI = "https://github.com/MariaDB/server/releases"
 
@@ -62,7 +62,8 @@ PACKAGECONFIG[setupdb] = ", ,,${PN}-setupdb"
 # MariaDB doesn't link properly with gold
 # https://mariadb.atlassian.net/browse/MDEV-5982
 TARGET_CFLAGS += "-fuse-ld=bfd"
-
+LDFLAGS += " -pthread"
+LDFLAGS_append_armv5 = " -latomic"
 BUILD_CFLAGS += "-fuse-ld=bfd"
 BUILD_CXXFLAGS += "-fuse-ld=bfd"
 
@@ -120,6 +121,11 @@ do_compile_prepend_class-target () {
             echo "#endif" >>${B}/include/openssl/kssl.h
         fi
     fi
+    # workaround to handle out-of-source build from source package
+    yacc_files="sql_yacc.hh sql_yacc.cc sql_yacc_ora.hh sql_yacc_ora.cc"
+    for yacc_file in ${yacc_files}; do
+        cp ${S}/sql/${yacc_file} ${B}/sql/${yacc_file}
+    done
 }
 
 SYSROOT_PREPROCESS_FUNCS += "mariadb_sysroot_preprocess"
@@ -181,13 +187,13 @@ RDEPENDS_${PN}-client = "perl perl-module-getopt-long perl-module-file-temp \
 RDEPENDS_${PN}-server = "perl perl-module-getopt-long perl-module-data-dumper \
     perl-module-file-basename perl-module-file-path perl-module-sys-hostname \
     perl-module-file-copy perl-module-file-temp perl-module-posix \
-    ${PN}-client libdbi-perl libdbd-mysql-perl"
+    ${PN}-client ${PN}-setupdb libdbi-perl libdbd-mysql-perl"
 RDEPENDS_${PN}-leftovers = "perl perl-module-cwd perl-module-benchmark perl-module-getopt-long \
     perl-module-posix perl-module-data-dumper perl-module-sigtrap perl-module-threads \
     perl-module-threads-shared perl-module-io-socket perl-module-sys-hostname perl-module-file-copy \
     perl-module-file-spec perl-module-file-find perl-module-file-basename perl-module-file-path \
     perl-module-constant perl-module-lib perl-module-file-temp perl-module-file-spec-functions \
-    perl-module-io-socket-inet perl-module-io-select"
+    perl-module-io-socket-inet perl-module-io-select bash"
 RDEPENDS_${PN}-setupdb = "coreutils"
 
 # Allow old code to link to the backward compatible library
@@ -195,10 +201,12 @@ RDEPENDS_libmysqlclient-dev = "libmysqlclient-r-dev"
 
 FILES_libmysqlclient = "\
     ${libdir}/libmysqlclient.so.* \
+    ${libdir}/libmariadb.so.* \
     ${sysconfdir}/my.cnf.d/client.cnf"
 FILES_libmysqlclient-dev = " \
     ${includedir}/mysql/ \
     ${libdir}/libmysqlclient.so \
+    ${libdir}/libmariadb.so \
     ${sysconfdir}/aclocal \
     ${bindir}/mysql_config"
 FILES_libmysqlclient-staticdev = "\
@@ -215,9 +223,11 @@ FILES_libmysqlclient-r-dev = "\
 FILES_libmysqlclient-r-staticdev = "${libdir}/libmysqlclient_r.a"
 
 FILES_libmysqld = "\
-    ${libdir}/libmysqld.so.*"
+    ${libdir}/libmysqld.so.* \
+    ${libdir}/libmariadbd.so.*"
 FILES_libmysqld-dev = "\
-    ${libdir}/libmysqld.so"
+    ${libdir}/libmysqld.so \
+    ${libdir}/libmariadbd.so"
 
 FILES_${PN}-client = "\
     ${bindir}/myisam_ftdump \