diff --git a/make/common/NativeCompilation.gmk b/make/common/NativeCompilation.gmk
index d961cf3..9679f97 100644
--- a/make/common/NativeCompilation.gmk
+++ b/make/common/NativeCompilation.gmk
@@ -383,10 +383,6 @@ define SetupNativeCompilation
     $$(error Unknown value for OPTIMIZATION: $$($1_OPTIMIZATION))
   endif
 
-  # Add sys root specific cflags last
-  $1_EXTRA_CFLAGS += $(SYSROOT_CFLAGS)
-  $1_EXTRA_CXXFLAGS += $(SYSROOT_CFLAGS)
-
   # Now call add_native_source for each source file we are going to compile.
   $$(foreach p,$$($1_SRCS), \
       $$(eval $$(call add_native_source,$1,$$p,$$($1_OBJECT_DIR), \
@@ -432,8 +428,6 @@ define SetupNativeCompilation
     $1_EXTRA_LDFLAGS += $(call SET_SHARED_LIBRARY_MAPFILE,$$($1_REAL_MAPFILE))
   endif
 
-  $1_EXTRA_LDFLAGS += $(SYSROOT_LDFLAGS)
-
   $1 := $$($1_TARGET)
   ifneq (,$$($1_LIBRARY))
     # Generating a dynamic library.